Enable_s3_uploads not applied at Theme Import

Under Admin -> Settings -> enable s3 uploads is checked.
S3 is configured properly, new post images are uploaded to S3.

Yet if I go to Admin -> Customize -> Themes -> Import, the Uploads attached to the theme get stored in the local uploads folder (not in S3).

However, if you use Admin -> Customize -> Themes -> Uploads and choose Add to manually add new Uploads, the upload will be submitted to S3.

Installed v2.0.0.beta10 +5

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Is this a hosted instance or self-installed?