Help restoring - system hung at midnight

So to get it up and running from a backup, I had to

  1. disable Settings → Files → enable s3 uploads
  2. Settings → Backups → backup location → S3
  3. enable Settings → Backups → backup with uploads

Then I took a backup and I was able to restore it successfully. However one things did break, all the attachments (files) not have invalid links. The images are all good, but attachments links like https://domain.com/uploads/short-url/phu1HOLvkE8LWpkKYfnMPSWsvHh.zip now give me a error

Oops! That page doesn’t exist or is private.

Is there a way to fix these short-url links?