Can't rebuild due to failed postgres 12 upgrade

pr0cesor · July 11, 2020, 1:43am

Hi there,

I am stuck with the following. When executing the commande ./discourse-setup, I have the following error

Im not sure I understand the message, my website is live and running https://cp2077.eu/ with SSL.

Here is my app.yml

## this is the all-in-one, standalone Discourse Docker container template
##
## After making changes to this file, you MUST rebuild
## /var/discourse/launcher rebuild app
##
## BE *VERY* CAREFUL WHEN EDITING!
## YAML FILES ARE SUPER SUPER SENSITIVE TO MISTAKES IN WHITESPACE OR ALIGNMENT!
## visit http://www.yamllint.com/ to validate this file as needed

templates:
  - "templates/postgres.template.yml"
  - "templates/redis.template.yml"
  - "templates/web.template.yml"
  - "templates/sshd.template.yml"
  - "templates/web.ratelimited.template.yml"
## Uncomment these two lines if you wish to add Lets Encrypt (https)
##  - "templates/web.ssl.template.yml"
##  - "templates/web.letsencrypt.ssl.template.yml"
  - "templates/web.socketed.template.yml"
## which TCP/IP ports should this container expose?
## If you want Discourse to share a port with another webserver like Apache or nginx,
## see https://meta.discourse.org/t/17247 for details
#expose:
# - "2045:80"   # http
# - "1443:443" # https

params:
  db_default_text_search_config: "pg_catalog.english"

  ## Set db_shared_buffers to a max of 25% of the total memory.
  ## will be set automatically by bootstrap based on detected RAM, or you can override
  db_shared_buffers: "1024MB"

  ## can improve sorting performance, but adds memory usage per-connection
  #db_work_mem: "40MB"

  ## Which Git revision should this container use? (default: tests-passed)
  #version: tests-passed

env:
  LANG: en_US.UTF-8
  # DISCOURSE_DEFAULT_LOCALE: en

  ## How many concurrent web requests are supported? Depends on memory and CPU cores.
  ## will be set automatically by bootstrap based on detected CPUs, or you can override
  UNICORN_WORKERS: 4

  ## TODO: The domain name this Discourse instance will respond to
  ## Required. Discourse will not work with a bare IP number.
  DISCOURSE_HOSTNAME: cp2077.eu

  ## Uncomment if you want the container to be started with the same
  ## hostname (-h option) as specified above (default "$hostname-$config")
  #DOCKER_USE_HOSTNAME: true

  ## TODO: List of comma delimited emails that will be made admin and developer
  ## on initial signup example 'user1@example.com,user2@example.com'
  DISCOURSE_DEVELOPER_EMAILS: 'myemail@yandex.com'

  ## TODO: The SMTP mail server used to validate new accounts and send notifications
  # SMTP ADDRESS, username, and password are required
  # WARNING the char '#' in SMTP password can cause problems!
  DISCOURSE_SMTP_ADDRESS: smtp.mailgun.org
  DISCOURSE_SMTP_PORT: 587
  DISCOURSE_SMTP_USER_NAME: ******
  DISCOURSE_SMTP_PASSWORD: ******
  DISCOURSE_SMTP_ENABLE_START_TLS: true           # (optional, default true)

  ## If you added the Lets Encrypt template, uncomment below to get a free SSL certificate
  LETSENCRYPT_ACCOUNT_EMAIL: myemail@yandex.com

  ## The http or https CDN address for this Discourse instance (configured to pull)
  ## see https://meta.discourse.org/t/14857 for details
  #DISCOURSE_CDN_URL: https://discourse-cdn.example.com

## The Docker container is stateless; all data is stored in /shared
volumes:
  - volume:
 host: /var/discourse/shared/standalone
  guest: /shared
  - volume:
  host: /var/discourse/shared/standalone/log/var-log
  guest: /var/log

## Plugins go here
## see https://meta.discourse.org/t/19157 for details
hooks:
  after_code:
- exec:
    cd: $home/plugins
    cmd:
      - git clone https://github.com/discourse/docker_manager.git

## Any custom commands to run after building
run:
  - exec: echo "Beginning of custom commands"
  ## If you want to set the 'From' email address for your first registration, uncomment and change:
  ## After getting the first signup email, re-comment the line. It only needs to run once.
  ## - exec: rails r "SiteSetting.notification_email='beatlicious@yandex.com'"
  - exec: echo "End of custom commands"

When I do the command ./launcher rebuild app, I have the following error:

fatal: not a git repository (or any of the parent directories): .git
Stopping old container
+ /usr/bin/docker stop -t 60 app
app
cd /pups && git pull && /pups/bin/pups --stdin
Already up to date.
I, [2020-07-11T01:41:07.468750 #1]  INFO -- : Loading --stdin
I, [2020-07-11T01:41:07.482322 #1]  INFO -- : > locale-gen $LANG && update-locale
I, [2020-07-11T01:41:07.556578 #1]  INFO -- : Generating locales (this might take a while)...
Generation complete.

I, [2020-07-11T01:41:07.557419 #1]  INFO -- : > mkdir -p /shared/postgres_run
I, [2020-07-11T01:41:07.562170 #1]  INFO -- :
I, [2020-07-11T01:41:07.562833 #1]  INFO -- : > chown postgres:postgres /shared/postgres_run
I, [2020-07-11T01:41:07.568411 #1]  INFO -- :
I, [2020-07-11T01:41:07.569223 #1]  INFO -- : > chmod 775 /shared/postgres_run
I, [2020-07-11T01:41:07.576449 #1]  INFO -- :
I, [2020-07-11T01:41:07.577398 #1]  INFO -- : > rm -fr /var/run/postgresql
I, [2020-07-11T01:41:07.582904 #1]  INFO -- :
I, [2020-07-11T01:41:07.583623 #1]  INFO -- : > ln -s /shared/postgres_run /var/run/postgresql
I, [2020-07-11T01:41:07.592257 #1]  INFO -- :
I, [2020-07-11T01:41:07.593134 #1]  INFO -- : > socat /dev/null UNIX-CONNECT:/shared/postgres_run/.s.PGSQL.5432 || exit 0 && echo postgres already running stop container ; exit 1
2020/07/11 01:41:07 socat[27] E connect(6, AF=1 "/shared/postgres_run/.s.PGSQL.5432", 36): No such file or directory
I, [2020-07-11T01:41:07.602436 #1]  INFO -- :
I, [2020-07-11T01:41:07.602977 #1]  INFO -- : > rm -fr /shared/postgres_run/.s*
I, [2020-07-11T01:41:07.608907 #1]  INFO -- :
I, [2020-07-11T01:41:07.609638 #1]  INFO -- : > rm -fr /shared/postgres_run/*.pid
I, [2020-07-11T01:41:07.619803 #1]  INFO -- :
I, [2020-07-11T01:41:07.622598 #1]  INFO -- : > mkdir -p /shared/postgres_run/10-main.pg_stat_tmp
I, [2020-07-11T01:41:07.629638 #1]  INFO -- :
I, [2020-07-11T01:41:07.630522 #1]  INFO -- : > chown postgres:postgres /shared/postgres_run/10-main.pg_stat_tmp
I, [2020-07-11T01:41:07.639523 #1]  INFO -- :
I, [2020-07-11T01:41:07.651076 #1]  INFO -- : File > /etc/service/postgres/run  chmod: +x  chown:
I, [2020-07-11T01:41:07.660620 #1]  INFO -- : File > /etc/service/postgres/log/run  chmod: +x  chown:
I, [2020-07-11T01:41:07.668238 #1]  INFO -- : File > /etc/runit/3.d/99-postgres  chmod: +x  chown:
I, [2020-07-11T01:41:07.679949 #1]  INFO -- : File > /root/upgrade_postgres  chmod: +x  chown:
I, [2020-07-11T01:41:07.680746 #1]  INFO -- : > chown -R root /var/lib/postgresql/10/main
chown: cannot access '/var/lib/postgresql/10/main': No such file or directory
I, [2020-07-11T01:41:07.685326 #1]  INFO -- :


FAILED
--------------------
Pups::ExecError: chown -R root /var/lib/postgresql/10/main failed with return #<Process::Status: pid 42 exit 1>
Location of failure: /pups/lib/pups/exec_command.rb:112:in `spawn'
exec failed with the params {"cmd"=>["chown -R root /var/lib/postgresql/10/main", "[ ! -e /shared/postgres_data ] && install -d -m 0755 -o postgres -g postgres /shared/postgres_data && sudo -E -u postgres /usr/lib/postgresql/10/bin/initdb -D /shared/postgres_data || exit 0", "chown -R postgres:postgres /shared/postgres_data", "chown -R postgres:postgres /var/run/postgresql"]}
d639e83f5451b5039efb2333f3eca1166d34ff6dc582ee29a0734a4274080fa2
** FAILED TO BOOTSTRAP ** please scroll up and look for earlier error messages, there may be more than one.
./discourse-doctor may help diagnose the problem.
atlas@sknet:~/www/cp2077$

Can someone advise me how can I install and setup discourse? I followed the guide and stuck here. Thank you

pfaffman · July 11, 2020, 2:22am

You followed Discourse official Standard Installation?

I don’t see how that site could be from the app.yml you include.

I’d create a new droplet and follow the directions again.

pr0cesor · July 11, 2020, 4:16am

I followed the guide yes, as you noticed I said after executing the command I am getting errors. What do you mean you don’t see how the site could be from the app.yml? its the same host domain name. Can you elaborate on that?

itsbhanusharma · July 11, 2020, 4:18am

This means You have DNS issues. Your domain is pointing to some other IP.

Could you confirm this is the correct IP?

pr0cesor · July 11, 2020, 4:22am

That’s the IP of my website yeah. I checked my DNS, everything is set correctly otherwise you wouldn’t see that the website is live.

If you ping my website, you will see the same IP address.

Benjamin_D · July 11, 2020, 4:47am

There might be some issue with your nginx (or other) conf ?

did it work before? with the port exposed?

pr0cesor · July 11, 2020, 5:08pm

Below my nginx

server {

    listen 80;
    listen [::]:80;
    server_name www.cp2077.eu;
    return 301 https://cp2077.eu$request_uri;
}

server {

    listen 443 ssl;
    listen [::]:443 ssl;
    server_name www.cp2077.eu;
    ssl_certificate /etc/letsencrypt/live/cp2077.eu/fullchain.pem;
    ssl_certificate_key /etc/letsencrypt/live/cp2077.eu/privkey.pem;
    return 301 https://cp2077.eu$request_uri;
}

server {

    listen 443 ssl http2;
    listen [::]:443 ssl http2;
    server_name cp2077.eu;

    ssl on;
    ssl_certificate /etc/letsencrypt/live/cp2077.eu/fullchain.pem;
    ssl_certificate_key /etc/letsencrypt/live/cp2077.eu/privkey.pem;

    include /etc/nginx/snippets/ssl.conf;

    http2_idle_timeout 5m; # up from 3m default

    location / {
        proxy_pass http://unix:/var/discourse/shared/standalone/nginx.http.sock;
        proxy_set_header Host $http_host;
        proxy_http_version 1.1;
        proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
        proxy_set_header X-Forwarded-Proto https;
        proxy_set_header X-Real-IP $remote_addr;

    }


}

To be honest I have no clue what else is wrong. The website is up and running and is connected to port 443.

pr0cesor · July 11, 2020, 5:11pm

Does not matter what I change, as soon as I run the commend ./launcher rebuild app, it throws an error as well

$  ./launcher rebuild app
fatal: not a git repository (or any of the parent directories): .git
Stopping old container
+ /usr/bin/docker stop -t 60 app
app
(<unknown>): did not find expected key while parsing a block mapping at line 10 column 1 -e LANG=en_US.UTF-8
YAML syntax error. Please check your containers/*.yml config files.

pr0cesor · July 11, 2020, 5:15pm

$ ./launcher rebuild app
fatal: not a git repository (or any of the parent directories): .git
Stopping old container
+ /usr/bin/docker stop -t 60 app
app
cd /pups && git pull && /pups/bin/pups --stdin
Already up to date.
I, [2020-07-11T17:12:58.113241 #1]  INFO -- : Loading --stdin
I, [2020-07-11T17:12:58.134955 #1]  INFO -- : > locale-gen $LANG && update-locale
I, [2020-07-11T17:12:58.173307 #1]  INFO -- : Generating locales (this might take a while)...
Generation complete.

I, [2020-07-11T17:12:58.174132 #1]  INFO -- : > mkdir -p /shared/postgres_run
I, [2020-07-11T17:12:58.178306 #1]  INFO -- :
I, [2020-07-11T17:12:58.178561 #1]  INFO -- : > chown postgres:postgres /shared/postgres_run
I, [2020-07-11T17:12:58.181917 #1]  INFO -- :
I, [2020-07-11T17:12:58.182391 #1]  INFO -- : > chmod 775 /shared/postgres_run
I, [2020-07-11T17:12:58.185755 #1]  INFO -- :
I, [2020-07-11T17:12:58.186224 #1]  INFO -- : > rm -fr /var/run/postgresql
I, [2020-07-11T17:12:58.189632 #1]  INFO -- :
I, [2020-07-11T17:12:58.190021 #1]  INFO -- : > ln -s /shared/postgres_run /var/run/postgresql
I, [2020-07-11T17:12:58.192947 #1]  INFO -- :
I, [2020-07-11T17:12:58.193285 #1]  INFO -- : > socat /dev/null UNIX-CONNECT:/shared/postgres_run/.s.PGSQL.5432 || exit 0 && echo postgres already running stop container ; exit 1
2020/07/11 17:12:58 socat[27] E connect(6, AF=1 "/shared/postgres_run/.s.PGSQL.5432", 36): No such file or directory
I, [2020-07-11T17:12:58.199237 #1]  INFO -- :
I, [2020-07-11T17:12:58.199649 #1]  INFO -- : > rm -fr /shared/postgres_run/.s*
I, [2020-07-11T17:12:58.203817 #1]  INFO -- :
I, [2020-07-11T17:12:58.204106 #1]  INFO -- : > rm -fr /shared/postgres_run/*.pid
I, [2020-07-11T17:12:58.208244 #1]  INFO -- :
I, [2020-07-11T17:12:58.208674 #1]  INFO -- : > mkdir -p /shared/postgres_run/10-main.pg_stat_tmp
I, [2020-07-11T17:12:58.213559 #1]  INFO -- :
I, [2020-07-11T17:12:58.215200 #1]  INFO -- : > chown postgres:postgres /shared/postgres_run/10-main.pg_stat_tmp
I, [2020-07-11T17:12:58.220491 #1]  INFO -- :
I, [2020-07-11T17:12:58.228222 #1]  INFO -- : File > /etc/service/postgres/run  chmod: +x  chown:
I, [2020-07-11T17:12:58.234341 #1]  INFO -- : File > /etc/service/postgres/log/run  chmod: +x  chown:
I, [2020-07-11T17:12:58.240097 #1]  INFO -- : File > /etc/runit/3.d/99-postgres  chmod: +x  chown:
I, [2020-07-11T17:12:58.245972 #1]  INFO -- : File > /root/upgrade_postgres  chmod: +x  chown:
I, [2020-07-11T17:12:58.246504 #1]  INFO -- : > chown -R root /var/lib/postgresql/10/main
chown: cannot access '/var/lib/postgresql/10/main': No such file or directory
I, [2020-07-11T17:12:58.249988 #1]  INFO -- :


FAILED
--------------------
Pups::ExecError: chown -R root /var/lib/postgresql/10/main failed with return #<Process::Status: pid 42 exit 1>
Location of failure: /pups/lib/pups/exec_command.rb:112:in `spawn'
exec failed with the params {"cmd"=>["chown -R root /var/lib/postgresql/10/main", "[ ! -e /shared/postgres_data ] && install -d -m 0755 -o postgres -g postgres /shared/postgres_data && sudo -E -u postgres /usr/lib/postgresql/10/bin/initdb -D /shared/postgres_data || exit 0", "chown -R postgres:postgres /shared/postgres_data", "chown -R postgres:postgres /var/run/postgresql"]}
cf48a849a885246d6bf9b1b444e679ff6c71dd2fa3b298d42fa2cc67694fc9b5
** FAILED TO BOOTSTRAP ** please scroll up and look for earlier error messages, there may be more than one.
./discourse-doctor may help diagnose the problem.

pfaffman · July 11, 2020, 8:09pm

You have a formatting error on your yml file.

pr0cesor · July 11, 2020, 8:51pm

I already pasted here the yml file, I don’t see any formating error there, do you?

michaeld · July 11, 2020, 9:16pm

Yes, the indentation is bad there.

pr0cesor · July 11, 2020, 9:38pm

The app.yml file comes from templates and what never touched the lines that you are suggesting me so I don’t understand how it could be bad if that is what has been provisioned from you guys.

codinghorror · July 11, 2020, 10:14pm

Ok, regardless, you have next steps on what to do, so I suggest you follow them

itsbhanusharma · July 12, 2020, 5:21am

I think the error Discourse setup is giving is legit because of the reverse proxy.

I see that you’ve already got changes done to the app.yml so why not just ./launcher rebuild app ?

pr0cesor · July 12, 2020, 3:13pm

I’ve pasted it here many times but I will do it again. Here is what I get when running that command:

$ ./launcher rebuild app
fatal: not a git repository (or any of the parent directories): .git
Stopping old container
+ /usr/bin/docker stop -t 60 app
app
cd /pups && git pull && /pups/bin/pups --stdin
Already up to date.
I, [2020-07-11T17:12:58.113241 #1]  INFO -- : Loading --stdin
I, [2020-07-11T17:12:58.134955 #1]  INFO -- : > locale-gen $LANG && update-locale
I, [2020-07-11T17:12:58.173307 #1]  INFO -- : Generating locales (this might take a while)...
Generation complete.

I, [2020-07-11T17:12:58.174132 #1]  INFO -- : > mkdir -p /shared/postgres_run
I, [2020-07-11T17:12:58.178306 #1]  INFO -- :
I, [2020-07-11T17:12:58.178561 #1]  INFO -- : > chown postgres:postgres /shared/postgres_run
I, [2020-07-11T17:12:58.181917 #1]  INFO -- :
I, [2020-07-11T17:12:58.182391 #1]  INFO -- : > chmod 775 /shared/postgres_run
I, [2020-07-11T17:12:58.185755 #1]  INFO -- :
I, [2020-07-11T17:12:58.186224 #1]  INFO -- : > rm -fr /var/run/postgresql
I, [2020-07-11T17:12:58.189632 #1]  INFO -- :
I, [2020-07-11T17:12:58.190021 #1]  INFO -- : > ln -s /shared/postgres_run /var/run/postgresql
I, [2020-07-11T17:12:58.192947 #1]  INFO -- :
I, [2020-07-11T17:12:58.193285 #1]  INFO -- : > socat /dev/null UNIX-CONNECT:/shared/postgres_run/.s.PGSQL.5432 || exit 0 && echo postgres already running stop container ; exit 1
2020/07/11 17:12:58 socat[27] E connect(6, AF=1 "/shared/postgres_run/.s.PGSQL.5432", 36): No such file or directory
I, [2020-07-11T17:12:58.199237 #1]  INFO -- :
I, [2020-07-11T17:12:58.199649 #1]  INFO -- : > rm -fr /shared/postgres_run/.s*
I, [2020-07-11T17:12:58.203817 #1]  INFO -- :
I, [2020-07-11T17:12:58.204106 #1]  INFO -- : > rm -fr /shared/postgres_run/*.pid
I, [2020-07-11T17:12:58.208244 #1]  INFO -- :
I, [2020-07-11T17:12:58.208674 #1]  INFO -- : > mkdir -p /shared/postgres_run/10-main.pg_stat_tmp
I, [2020-07-11T17:12:58.213559 #1]  INFO -- :
I, [2020-07-11T17:12:58.215200 #1]  INFO -- : > chown postgres:postgres /shared/postgres_run/10-main.pg_stat_tmp
I, [2020-07-11T17:12:58.220491 #1]  INFO -- :
I, [2020-07-11T17:12:58.228222 #1]  INFO -- : File > /etc/service/postgres/run  chmod: +x  chown:
I, [2020-07-11T17:12:58.234341 #1]  INFO -- : File > /etc/service/postgres/log/run  chmod: +x  chown:
I, [2020-07-11T17:12:58.240097 #1]  INFO -- : File > /etc/runit/3.d/99-postgres  chmod: +x  chown:
I, [2020-07-11T17:12:58.245972 #1]  INFO -- : File > /root/upgrade_postgres  chmod: +x  chown:
I, [2020-07-11T17:12:58.246504 #1]  INFO -- : > chown -R root /var/lib/postgresql/10/main
chown: cannot access '/var/lib/postgresql/10/main': No such file or directory
I, [2020-07-11T17:12:58.249988 #1]  INFO -- :


FAILED
--------------------
Pups::ExecError: chown -R root /var/lib/postgresql/10/main failed with return #<Process::Status: pid 42 exit 1>
Location of failure: /pups/lib/pups/exec_command.rb:112:in `spawn'
exec failed with the params {"cmd"=>["chown -R root /var/lib/postgresql/10/main", "[ ! -e /shared/postgres_data ] && install -d -m 0755 -o postgres -g postgres /shared/postgres_data && sudo -E -u postgres /usr/lib/postgresql/10/bin/initdb -D /shared/postgres_data || exit 0", "chown -R postgres:postgres /shared/postgres_data", "chown -R postgres:postgres /var/run/postgresql"]}
cf48a849a885246d6bf9b1b444e679ff6c71dd2fa3b298d42fa2cc67694fc9b5
** FAILED TO BOOTSTRAP ** please scroll up and look for earlier error messages, there may be more than one.
./discourse-doctor may help diagnose the problem.

Stephen · July 12, 2020, 4:03pm

Why are you proxying your discourse site instead of using a subdomain?

pr0cesor · July 12, 2020, 4:14pm

Im not sure I understand. I want my discourse forum to be on my main domain not as a subdomain.

Stephen · July 12, 2020, 4:16pm

If this is your first install you should really get it up and running as per the official guide before changing the configuration. It’s well documented elsewhere here on meta that subfolder has no benefits, it’s considered an advanced topic which can break at any time with updates.

pr0cesor · July 12, 2020, 4:19pm

No this is not my first install. This is actually my second install on another domain. Sometimes few months back I installed discourse on another domain using the same guide. I am repeating it again today and stuck with those problems above. There is nothing special that I did, I was following the guide as it was before.

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Can't rebuild due to failed postgres 12 upgrade

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